如果是这种情况,我该怎么办呢？我会在默认的虚拟主机文件中执行此操作吗？

一个例子是：
OpenCart附带2个主要用于mod_rewrite的htaccess文件,如果我将其移动到< Directory>这会有所作为吗？

<VirtualHost *:80>
    ServerAdmin www@shop.co.uk
    ServerName shop.co.uk
    ServerAlias www.shop.co.uk
    DocumentRoot /var/www/shop/public

    <Directory /var/www/shop/public>
        Options +FollowSymlinks

        # Prevent Direct Access to files
        <FilesMatch "\.(tpl|ini|log)">
         Order deny,allow
         Deny from all
        </FilesMatch>

        RewriteEngine On
        RewriteBase /
        RewriteCond %{REQUEST_FILENAME} !-f
        RewriteCond %{REQUEST_FILENAME} !-d
        RewriteRule ^([^?]*) index.PHP?_route_=$1 [L,QSA]
    </Directory>

    <Directory /var/www/shop/public/admin/view/javascript/ckeditor>
        AddType application/x-javascript .js
        AddType text/css .css

        # If PHP is mapped to handle XML files,you could have some issues. The following will disable it.
        AddType text/xml .xml
    </Directory>

    ErrorLog /var/log/apache2/shop-error.log
    LogLevel warn
    CustomLog /var/log/apache2/shop-access.log combined
</VirtualHost>