解决办法：

打开Android工程中的.cproject文件，删除下面代码即可。

<cconfiguration id="0.1230402123.1377291156">
            <storageModule buildSystemId="org.eclipse.cdt.managedbuilder.core.configurationDataProvider" id="0.1230402123.1377291156" moduleId="org.eclipse.cdt.core.settings" name="Debug">
                <externalSettings/>
                <extensions>
                    <extension id="org.eclipse.cdt.core.VCErrorParser" point="org.eclipse.cdt.core.ErrorParser"/>
                    <extension id="org.eclipse.cdt.core.GmakeErrorParser" point="org.eclipse.cdt.core.ErrorParser"/>
                    <extension id="org.eclipse.cdt.core.CWDLocator" point="org.eclipse.cdt.core.ErrorParser"/>
                    <extension id="org.eclipse.cdt.core.GCCErrorParser" point="org.eclipse.cdt.core.ErrorParser"/>
                    <extension id="org.eclipse.cdt.core.GASErrorParser" point="org.eclipse.cdt.core.ErrorParser"/>
                    <extension id="org.eclipse.cdt.core.GLDErrorParser" point="org.eclipse.cdt.core.ErrorParser"/>
                </extensions>
            </storageModule>
            <storageModule moduleId="org.eclipse.cdt.core.externalSettings"/>
        </cconfiguration>